Sozzani Lab

Publications

1.      de Luis Balaguer MA, Fisher AP, Clark NM, Moller B. Weijers D, Williams C. Sozzani R. An inference approach combines spatial and temporal gene expression data to predict gene regulatory networks in Arabidopsis stem cells.  PNAS (under review)

2.      Clark NM, Hinde E, Winter CM, Fisher AP, Crosti G, Blilou I, Gratton E, Benfey PN, Sozzani R. Tracking transcription factor mobility and interaction in Arabidopsis roots with fluorescence correlation spectroscopy. eLife, 2016

3.      de Luis Balaguer MA, Ramos-Pezzotti M, Rahhal MB, Melvin CE, Johannes E, Horn TJ, Sozzani R. Multi-sample Arabidopsis Growth and Imaging Chamber (MAGIC) for long term imaging in the ZEISS Lightsheet Z.1. Developmental Biology, 2016

4.      Fisher AP, Sozzani R. Uncovering the networks involved in stem cell maintenance and asymmetric cell division in the Arabidopsis root. Current Opinion in Plant Biology, 2016

5.      Slattery RA, Grennan AK, Sivaguru M, Sozzani R, Ort DR. Light sheet microscopy reveals more gradual light attenuation in light-green versus dark-green soybean leaves. Journal of Experimental Botany, 2016

6.      Moreno-Risueno MA, Sozzani R, Yardımcı GG, Petricka JJ, Vernoux T, Blilou I, Alonso J, Winter CM, Ohler U, Scheres B, Benfey PN. Transcriptional control of tissue formation throughout root development. Science, 2015

7.      Clark NM, de Luis Balaguer MA, Sozzani R. Experimental data and computational modeling link auxin gradient and development in the Arabidopsis root. Frontiers in Plant Sciences, 2014

8.      Gallagher, KL, Sozzani R, Lee C-M.  Intercellular protein movement: deciphering the language of development. Annual Review of Cell and Developmental Biology, 2014

9.      Sozzani R, Iyer-Pascuzzi. Post-embyronic control of root meristem growth and development. Current Opinion in Plant Biology, 2014

10.   Sozzani R, Busch W, Spalding EP, Benfey PN. Advanced imaging in the study of plants.   Trends in Plant Science, 2014

11.   Kajala K, Ramakrishna P, Fisher AP, Bergmann D, De Smet I, Sozzani R, Weijers D and Brady SM. Omics and modelling approaches for understanding regulation of asymmetric cell divisions in arabidopsis and other angiosperm plants. Annals of Botany, 2014

12.   Moubayidin L, Di Mambro R, Sozzani R, Pacifici E, Salvi E, Terpstra I, Bao D, van Dijken A, Dello Ioio R, Perilli S, Ljung K, Benfey PN, Heidstra R, Costantino P, Sabatini S. Spatial Coordination between Stem Cell Activity and Cell Differentiation in the Root Meristem. Developmental Cell, 2013

13.   Cruz-Ramírez A, Díaz-Triviño S, Blilou I, Grieneisen VA, Sozzani R, Zamioudis C, Miskolczi P, Nieuwland J, Benjamins R, Dhonukshe P, Caballero-Pérez J, Horvath B, Long Y, Mähönen AP, Zhang H, Xu J, Murray JA, Benfey PN, Bako L, Marée AF, Scheres B. A Bistable Circuit Involving SCARECROW-RETINOBLASTOMA Integrates Cues to Inform Asymmetric Stem Cell Division. Cell, 2012

14.   Liberman LM, Sozzani R, Benfey PN. Integrative systems biology: an attempt to describe a simple weed.  Current Opinion in Plant Biology, 2012.

15.   Engstrom EM, Andersen CM, Gumulak-Smith J, Hu J, Orlova E, Sozzani R, Bowman JL. Arabidopsis homologs of the petunia hairy meristem gene are required for maintenance of shoot and root indeterminacy.  Plant Physiology, 2011.

16.   Sozzani R, Benfey P.N. High throughput phenotyping: finding the link between genotype and phenotype. Genome Biology, 2011.

17.   Sozzani R, Cui H, Moreno-Risueno M.A, Busch W, Van Norman J.M, Vernoux T, Brady S.M, Dewitte W, Murray J.A, Benfey P.N. The SHR/SCR pathway directly activates genes involved in asymmetric cell division in the Arabidopsis root. Nature, 2010.

18.   Sozzani R, Maggio C, Giordo R, Umana E, Bergounioux C, Ascencio-Ibañez JT, Hanley-Bowdoin L, Cella R, Albani D. The E2FD factor is a component of a regulatory network controlling cell proliferation in Arabidopsis. Plant Molecular Biology, 2010.

19.   Di An Ni, Sozzani R, Blanchet S, Domenichini S, Reuzeau C, Cella R, Bergounioux C and Raynaud C. The Arabidopsis MCM2 gene is essential to embryo development and its over-expression alters root meristem function. New Phytologist, 2009.

20.   Ascencio-Ibáñez JT, Sozzani R, Lee TJ, Chu TM, Wolfinger RD, Cella R, Hanley-Bowdoin L. Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. Plant Physiology, 2008.

21.   Raynaud C, Sozzani R, Glab N, Domenichini S, Perennes C, Cella R, Kondorosi E, Bergounioux C. Two cell-cycle regulated SET-domain proteins interact with PCNA in Arabidopsis. Plant Journal, 2006.

22.   Sozzani R, Maggio C, Varotto S, Canova S, Bergounioux C, Albani D and Cella R. Interplay between Arabidopsis activating factors E2Fb and E2Fa in cell cycle progression and development.  Plant Physiology, 2006.